Insertion junction: CLIP2.076985_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076985
Chromosome:chromosome 16
Location:6838944
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g671950 (1 of 7) IPR000305 - GIY-YIG nuclease superfamily 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGGTGGCGAGGCTCCTGCCGAAGGGGTCGTGTAGAACGGATGACAAGA
Internal bar code:CTGGTTTCCAAGAGCCTTGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2281
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGTGCCTTGTGTCTGAGA
Suggested primer 2:CACTTTTGCCTTGGGTTCGG