Insertion junction: CLIP2.076997_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076997
Chromosome:chromosome 3
Location:3827229
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170001 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCATTATTGCAGTTCTGGCCAATGCTATGGCATGAATCTTAAGTAGTT
Internal bar code:CATTAAGCGGGTCGATGGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3187
LEAP-Seq percent confirming:97.9167
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCAGCTCTTCTTGCCTGA
Suggested primer 2:ATGGCCCAGATTCCACCAAG