Insertion junction: CLIP2.076997_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076997
Chromosome:chromosome 3
Location:3827230
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170001 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCTTGGTTGAAAGATGCATCCCTCTCGAGGGATGCCGGGGCCTCGGCG
Internal bar code:TCTTTACCGTGGATTAGATGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1598
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCCCAGATTCCACCAAG
Suggested primer 2:GCTCAGCTCTTCTTGCCTGA