Insertion junction: CLIP2.077000_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077000
Chromosome:chromosome 3
Location:5739664
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g187250 (1 of 1) PF05514 - HR-like lesion-inducing (HR_lesion) 3'UTR
Cre03.g187300 (1 of 52) 2.7.11.22 - Cyclin-dependent kinase / Cdk-activating protein kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAAATCCCGGCAGCTGCCATATTACTGGCTAACATATAGCTCCACAAT
Internal bar code:ATTATAATCATTAGTGGGACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:5508
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTATCTCGAGCGACCCAG
Suggested primer 2:GTGGCTGGTATGATCGGAGG