Insertion junction: CLIP2.077001_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077001
Chromosome:chromosome 8
Location:93374
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358526 AAA1 Plastidic ADP/ATP translocase; (1 of 4) K03301 - ATP:ADP antiporter, AAA family (TC.AAA) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGCTGCCAAACAGGGCTGGCCGCGACGAAGAGCTGGGCAAGCTAGACC
Internal bar code:CCTATGGTAGCACTGTTCTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2526
LEAP-Seq percent confirming:79.4118
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCACAACCACCCCAAAAA
Suggested primer 2:CCCGCTGGCAGTCTATACAG