Insertion junction: CLIP2.077005_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077005
Chromosome:chromosome 3
Location:4803580
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178014 3'UTR
Cre03.g178050 MOT51 (1 of 12) IPR001680//IPR015943//IPR017986 - WD40 repeat // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGATTTCGCCTACTTCTGCCCTTCTCTGGTCATTAAAAGCTCCTGAAC
Internal bar code:AGAAACCGGTAAATTTATATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1869
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGCCCTACCTTCCTCACT
Suggested primer 2:CGCGTCTGCAAATAACCGAG