Insertion junction: CLIP2.077008_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077008
Chromosome:chromosome 6
Location:4844108
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280300 (1 of 1) PTHR11254//PTHR11254:SF324 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCGACCTCTCGCCCGCAGGCGCCCACACACCACAACATCGACGCTGCC
Internal bar code:GCGTGATTGATCGGTATTCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2679
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:169
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:169

Suggested primers for confirmation by PCR

Suggested primer 1:GAACCAGGGACCTAGGGGAT
Suggested primer 2:CGCAGAGTAGCAGGGATGAG