Insertion junction: CLIP2.077012_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077012
Chromosome:plastome
Location:175326
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802329 ChreCp064,psbD,2716961 (1 of 1) K02706 - photosystem II P680 reaction center D2 protein (psbD); photosystem II protein D2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGAAGTAACGAAAGTAGTACCAGTTAACCAACCACCTAATGCAAAGTA
Internal bar code:TGTTGCCGAGGGTGAGGGGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:54
LEAP-Seq percent confirming:23.0769
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGGGATAGGCCAGGCAAT
Suggested primer 2:ACGGAATGTGTTAGCACCGT