Insertion junction: CLIP2.077015_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077015
Chromosome:chromosome 17
Location:3728740
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726200 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTATTCCCCTAGCTAGGGGGCCCCCAGCTTCAGATTTTGGAAGTATGGCT
Internal bar code:TCCGGTGAACGGGGAGCATTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4608
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAAGGGTTGTTCTGGGCG
Suggested primer 2:GATGTGTGGAGGAGGTTGGG