Insertion junction: CLIP2.077021_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.077021
Chromosome:chromosome 13
Location:917619
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre13.g567901 (1 of 1) PTHR15451//PTHR15451:SF19 - FAMILY NOT NAMED // ERGOSTEROL BIOSYNTHETIC PROTEIN 28-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAAGCTTGACAGACGTCCAGGAGATCCCATAGATACCCACGAGCAGCG
Internal bar code:ATGTAGATGAACTCGGAGACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:363
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGATATGCTTGCTGTTGGCG
Suggested primer 2:TCGAAAAGCTGGGACTGGTC