Insertion junction: CLIP2.077025_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077025
Chromosome:chromosome 6
Location:284036
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g250800 CRB1 (1 of 1) K13210 - far upstream element-binding protein (FUBP); C1, subunit of the circadian RNA-binding protein CHLAMY1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCCTTAGGCTTGGACTCTGCCCAGTATATGAACTGGCTGCGGGCGTG
Internal bar code:ATTCTGCGAGCGTTTATTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4635
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTGTGAGAGGTGTGAGG
Suggested primer 2:CGAGACCACTTCGTCACACA