Insertion junction: CLIP2.077035_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077035
Chromosome:chromosome 10
Location:6657953
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g466250 PRP20 (1 of 1) K14554 - U3 small nucleolar RNA-associated protein 21 (UTP21, WDR36); Putative Utp21 subunit of U3 snoRNP intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGCTGCTGGTATCTGCTGCTTTCGTTTATCACCACCGCACCCACGCC
Internal bar code:TTTGAACCCAATCGTCTTGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:212
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTCCCACAAGCCGCATTT
Suggested primer 2:ATCGAAGGCTCACAAGGGTG