Insertion junction: CLIP2.077037_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077037
Chromosome:chromosome 9
Location:3353125
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395547 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGGCAGGGCATGGGGCAGCGGGGTTGGGCGGGATGATCGGAGCCGGC
Internal bar code:TTGTTATAGTGTAGTTCAGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3450
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGAACTCCCTATACGTGC
Suggested primer 2:AATATCGAGAGCCTGGCTGC