Insertion junction: CLIP2.077038_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077038
Chromosome:chromosome 12
Location:4275642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g518400 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACAGGAGTTCAATACGTGTTATAAGGAAAGCGGCACGAGCACATAAA
Internal bar code:TTAACTATGCAATAGACTAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1083
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTGAATCCGCGAACCTC
Suggested primer 2:AAGGAGGACGTAGAGGGACC