Insertion junction: CLIP2.077038_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.077038
Chromosome:chromosome 12
Location:4275642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g518400 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTATAGTGCTTGCCTGAGCGCAGACGGCAGTTGACCAACTTTAAACAG
Internal bar code:CAGTGAATGGATACTCCCGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2369
LEAP-Seq percent confirming:93.9394
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGAGGACGTAGAGGGACC
Suggested primer 2:GCATTGAATCCGCGAACCTC