Insertion junction: CLIP2.077044_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077044
Chromosome:chromosome 6
Location:1858306
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g263850 PPT2,TPT2,TPT20 Triose phosphate/phosphate translocator; (1 of 2) PTHR11132:SF70 - PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 1, CHLOROPLASTIC outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGGGCTGGGCGATGGGAAGGTGGTGGACTGAGCGTGGGTGAACCGGCC
Internal bar code:GTCATTCGTAACCTGAAAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1711
LEAP-Seq percent confirming:90.6977
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTCCAGTAGGCAGTGTG
Suggested primer 2:ATTATGTGGGAAGGGGCAGC