Insertion junction: CLIP2.077049_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077049
Chromosome:chromosome 16
Location:5375095
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683250 (1 of 1) PF05832 - Eukaryotic protein of unknown function (DUF846) (DUF846) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCCCCACTGCTCTGTCACCCGCAGGACCCCTCCAACCCTCTTTAGTTG
Internal bar code:TGAATGGGCATTAGTGACCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3038
LEAP-Seq percent confirming:98.8372
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTGCCCTTCCTCTTTTA
Suggested primer 2:GGAAGACGCACTCACCTCAA