Insertion junction: CLIP2.077063_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.077063
Chromosome:chromosome 5
Location:542466
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g244350 3'UTR
Cre05.g244400 (1 of 30) PF03407 - Nucleotide-diphospho-sugar transferase (Nucleotid_trans) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGTGGGACATTGCCCGTAGTCAAAGCTTGCAGGGATTCATGTAAGCTG
Internal bar code:CGTTCGTAGTAGGTGCTGCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:646
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGGGTGGGCTATCTGCTA
Suggested primer 2:CGTCTCTTGACCTGGGCATT