Insertion junction: CLIP2.077065_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.077065
Chromosome:chromosome 17
Location:3685574
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725750 (1 of 3) K11089 - 60 kDa SS-A/Ro ribonucleoprotein (TROVE2, SSA2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGCCAAAACAGTGATAGCCGCAGCAACGATCCACTCTAGGTATGCCCC
Internal bar code:CCTATCTTATGGGGCTTTCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3284
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCACGCTGATGTGCATGT
Suggested primer 2:AGCGCACAACACTACCGTAA