Insertion junction: CLIP2.077068_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077068
Chromosome:chromosome 6
Location:4673393
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278600 (1 of 1) PF11221 - Subunit 21 of Mediator complex (Med21) 3'UTR
Cre06.g278650 (1 of 1) PTHR11635//PTHR11635:SF127 - CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN // CAMP-DEPENDENT PROTEIN KINASE TYPE II REGULATORY SUBUNIT 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGGCTCCGTCTTTGGCCGCCTTAAGAGTATTTACGGTATCAGGTGCAT
Internal bar code:TGTCCACGGGTCTCAACATTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1432
LEAP-Seq percent confirming:9.52381
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:57
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGTGCGAGTTATGCAACG
Suggested primer 2:GCGGTTGCTATATCAGGGCT