Insertion junction: CLIP2.077070_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.077070
Chromosome:chromosome 16
Location:2704297
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661850 (1 of 2) PF08332 - Calcium/calmodulin dependent protein kinase II association domain (CaMKII_AD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATCCAAGGGTCGCGCGCGGCGCTAGCGGCGCCCATTACAGTAACCTG
Internal bar code:CCTGGTGTCCAGGCGGTGATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1014
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTCATCCTGGTCCTTGCACC
Suggested primer 2:CTGTGTCTGTTGTGCACACG