Insertion junction: CLIP2.077079_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077079
Chromosome:chromosome 1
Location:337024
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g001950 Predicted protein with 3-phosphoshikimate1-carboxyvinyltransferase core domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGTGCAAGCTGTGAGGCACGGATCCATGAAACATGCGTGGGGCAAGAT
Internal bar code:TTGGTTACGTGAACTTTTCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:698
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTGTGGGAGAAGGGGTC
Suggested primer 2:CCCGTGGACTGTTCGTAACA