Insertion junction: CLIP2.077079_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077079
Chromosome:chromosome 1
Location:337044
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g001950 Predicted protein with 3-phosphoshikimate1-carboxyvinyltransferase core domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAGGGACCAATCGGCTGTACGCTATGCTGGGATCCGTTCTTCCACAGC
Internal bar code:GCGATGTGTAACTGGGCGCCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2027
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGTGGACTGTTCGTAACA
Suggested primer 2:CATGTGTGGGAGAAGGGGTC