Insertion junction: CLIP2.077095_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077095
Chromosome:chromosome 16
Location:4285838
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g669250 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATAGTCTTGAACATGCGCCGGGCGCACGCGCGGAGGACCCGCTTTGCT
Internal bar code:TCTGATCATTTCTTGCAGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1305
LEAP-Seq percent confirming:48.6486
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCTCACTTTCCCGGATG
Suggested primer 2:ACACCGAATGCCTAACTGGG