Insertion junction: CLIP2.077097_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077097
Chromosome:chromosome 3
Location:3063218
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g163900 PWR3 (1 of 14) PF04720 - PDDEXK-like family of unknown function (PDDEXK_6); PWR motif protein 3'UTR
Cre03.g163950 CDO2 (1 of 2) 1.13.11.20 - Cysteine dioxygenase; Cysteine dioxygenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATCAACGCCCTACATCAACAGCAGGCCAGGGACTCGTGGTATGTGGTG
Internal bar code:GTGGCTGGGCGCGTCTCCTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2659
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACATCGAGGACTGCAG
Suggested primer 2:GGGTGCCAGCTGTATGAAGT