Insertion junction: CLIP2.077101_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077101
Chromosome:chromosome 17
Location:3330283
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g722650 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGATCACACCCCTTCCGCTATCCCCTTCCCTTCCCTTCGCCCTCAACC
Internal bar code:TAAATTGCTCCCAGCGCATATG

Confirmation - LEAP-Seq

LEAP-Seq distance:417
LEAP-Seq percent confirming:9.52381
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGAGGTGGACAACGAGAA
Suggested primer 2:CCAACAAACAGCTGCTGCAT