Insertion junction: CLIP2.077108_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077108
Chromosome:chromosome 2
Location:7417955
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392171 (1 of 14) PF04577 - Protein of unknown function (DUF563) (DUF563) 3'UTR
Cre09.g392208 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAGCACTGGCCGTGATGCCTAATGTCACCGCGCTAACTGCATGTGTTA
Internal bar code:ATGCATAGGTAAATTACACTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:566
LEAP-Seq percent confirming:21.875
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGGACATCACCAAGAAGA
Suggested primer 2:ATTGTCTGAGGAGCCACAGC