Insertion junction: CLIP2.077122_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077122
Chromosome:chromosome 2
Location:3572928
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099500 CVL1 Fe2+/Mn2+ transporter, VIT1/CCC1 family; (1 of 2) PF01988 - VIT family (VIT1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTTAACAATAGAGGCCGGCTTCAACACACCGTCGCGAGGGACCGGAGT
Internal bar code:GTCTAGCTAGAAGAGCGCTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:5018
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:AGACACGCGAGACCTCTACT
Suggested primer 2:CCTCCTTTCGATCGAGGTCG