Insertion junction: CLIP2.077129_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077129
Chromosome:chromosome 11
Location:3099288
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g475150 Similar to PKD2 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGGCTCGCCTAGCCCTGGTAGTAGCTTTCGTCGGTGTGAATTGCGGT
Internal bar code:CGACGACAGGGTTTGTATCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1256
LEAP-Seq percent confirming:32.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:ACACCCCATGTCCATGACAC
Suggested primer 2:CCAGGGAACTTGCTGCAGTA