Insertion junction: CLIP2.077130_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.077130
Chromosome:chromosome 6
Location:6460268
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293850 CAG2 Gamma carbonic anhydrase 2; (1 of 1) PTHR13061//PTHR13061:SF0 - DYNACTIN SUBUNIT P25 // GAMMA CARBONIC ANHYDRASE-LIKE 1, MITOCHONDRIAL-RELATED 3'UTR
Cre06.g293900 (1 of 1) PTHR23333:SF4 - UBX DOMAIN-CONTAINING PROTEIN 11 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATCACCATTCGATATGTCAAGTGTACCGTATTGCACGGTCATGCGCGG
Internal bar code:TAAAAAGGCCTGAGGGTAGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1012
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAAGCAGACCTTCATCCT
Suggested primer 2:ATCAACTTCCGCGAGCAGAA