Insertion junction: CLIP2.077135_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.077135
Chromosome:chromosome 17
Location:1349819
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g705836 (1 of 587) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase; Chlamydomonas-specific family W protein 5'UTR
Cre17.g705843 Chlamydomonas-specific family W protein; (1 of 6) PF06701 - Mib_herc2 (MIB_HERC2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCGCGAAGCTGACCCACGCAGAACGACCGTGCTTGCTGCTGCACGGCT
Internal bar code:GCGTGTGCACGAAGACGCTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:539
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGATCGATGCCGTAAGCCTC
Suggested primer 2:TTGTCCGTTGCGTCGTCTTA