Insertion junction: CLIP2.077137_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.077137
Chromosome:chromosome 16
Location:2739946
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g662000 HEL62 (1 of 1) K17679 - ATP-dependent RNA helicase MSS116, mitochondrial [EC:3.6.4.13] (MSS116); DEAD/DEAH box helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCAGGTGGGCCGGGGCTGGGAGGCTGGGGGCCCGGGCTGGGGGCAAGC
Internal bar code:AATAACTCTTGAACGTGGAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:979
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATGCAGTGTGAATTGCC
Suggested primer 2:CTGTTTGTTGTCGCTCACCG