Insertion junction: CLIP2.077141_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077141
Chromosome:chromosome 13
Location:3196551
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g585250 (1 of 1) PF08005 - PHR domain (PHR) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAAAAGCGCTGCAGGAGCTATGTCGCAAACGCGGTTAGTTATGGAGGCC
Internal bar code:GCGGCAGGGACTACGTGTGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2206
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CACTAGCGGGTGAGTTGTGT
Suggested primer 2:AGCGTCTGAAAGTTGAGCGA