Insertion junction: CLIP2.077147_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077147
Chromosome:chromosome 5
Location:2770892
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre05.g240850 THIC1,THIC,THI8 (1 of 1) 4.1.99.17 - Phosphomethylpyrimidine synthase; Hydroxymethylpyrimidine phosphate synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGACACACGGGTGCGGGAGGGCATGGGGGTTGGGAGGGTGAGTGTGAG
Internal bar code:GTTCCGCGACAAATTTCTGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:228
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGAGTGACGCGGATGAG
Suggested primer 2:CAGCTGTACGGCACTTACCA