Insertion junction: CLIP2.077162_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077162
Chromosome:chromosome 3
Location:3112246
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164500 (1 of 1) IPR026571 - Transmembrane protein 186 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTACGAGGCCCGATGCTGCCCCGGCACCCAGGGCCCTCCCGCGCCGCC
Internal bar code:AAGGGGTAGAGGTTTTCTAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1943
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCAGCTCGGGAGAACAG
Suggested primer 2:GGCACATGGCTTGCAAATGA