Insertion junction: CLIP2.077170_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077170
Chromosome:chromosome 17
Location:3662422
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802070 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTGAACTACTTGTGTGTGTGATGGGACAGGGTTCAAGGCAGGTTGGCG
Internal bar code:AGTCTGGTGCACTCTATGAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1505
LEAP-Seq percent confirming:86.2745
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:AACTCGGTAAGCCTCAGCAC
Suggested primer 2:CAGCTTAGCCAAGACTGCCT