Insertion junction: CLIP2.077173_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.077173
Chromosome:chromosome 10
Location:2789328
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438500 CPK3,MOT54,FAP264 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype; Flagellar Associated Protein 264 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTTAAGTCAATGCTGAGGCTTACGGCAGCAAACTCAAGAGGCCAGAA
Internal bar code:GCAACAATTCCGTTAGACAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1495
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGCACATGTACACGATG
Suggested primer 2:ACAGGTCCAAGTACCGCATG