Insertion junction: CLIP2.077177_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.077177
Chromosome:chromosome 10
Location:4651322
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g451800 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCCCCGATCTCTGGCCTAGTTGGCTTCACTAAACGTTTGCTATGCAG
Internal bar code:GAAGGAATTACTCGTGGTGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:707
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GTAACGCACCCAGACTCACA
Suggested primer 2:TAACAGCCACGGCATAGCAA