Insertion junction: CLIP2.077180_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077180
Chromosome:chromosome 11
Location:1084947
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g467671 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCATTCCAACATGCCCACCTCGCAGTGACCCCGCACAGCTAGCCTGCT
Internal bar code:GGATGGTGCGTTATCTATGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:256
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTGTGTGTTATTCCGGA
Suggested primer 2:TCCCCAAATCTCGCCAACTC