Insertion junction: CLIP2.077188_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.077188
Chromosome:chromosome 2
Location:5671787
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g116000 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAGCTGCCAGCACGGTTGCCACCTACATGTAATGACGCTATAATTCAG
Internal bar code:TGTAGGCAAGGGTATTAGGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3235
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGTGTGCCATTCTTTGC
Suggested primer 2:GTACGCTGGGGAGTGAAACA