Insertion junction: CLIP2.077188_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.077188
Chromosome:plastome
Location:90536
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802301 ycf3,ChreCp037,2717008,pafI (1 of 1) PTHR26312:SF81 - PHOTOSYSTEM I ASSEMBLY PROTEIN YCF3; photosystem I assembly factor I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATGTTGACCCTTTTGACTTGAAGTTGCCAGATTGATTTTTACTCTTCT
Internal bar code:CTGTTGAAACTGTTGTGTCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:77
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCCCATTACACGTGCAG
Suggested primer 2:CGCAGCTTAAAAGGCACGTT