Insertion junction: CLIP2.077191_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077191
Chromosome:chromosome 16
Location:6497997
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g674750 (1 of 2) PF01857 - Retinoblastoma-associated protein B domain (RB_B) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAACCATGCATACAGCATCAGCCGCCATGTGCATTTAGCATGCCCCG
Internal bar code:ACAATCCTAATCAATGCAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2068
LEAP-Seq percent confirming:47.619
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCTGCAGACTACCTACCT
Suggested primer 2:ATGTCTTCCCAACACGGACC