Insertion junction: CLIP2.077196_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077196
Chromosome:chromosome 6
Location:1675182
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g262300 CYN51 Cyclophilin 51; (1 of 2) K05864 - peptidyl-prolyl isomerase D [EC:5.2.1.8] (PPID, CYPD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCACGATACATGGGCGCTCCGGTGTCACTTTAGTGCACGGGTAGTGT
Internal bar code:CAACGGCGATACACTAGCGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2076
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCGTGTAGATCCACAACA
Suggested primer 2:GTGTGTTTGTGTGTACCGGC