Insertion junction: CLIP2.077202_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077202
Chromosome:chromosome 10
Location:3875062
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446250 (1 of 1) K13339 - peroxin-6 (PEX6, PXAAA1) 3'UTR
Cre10.g446275 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTCCATATGCAGGCCCCAGCGGCAGCAACAACCGCCAATGGCAATGAA
Internal bar code:GAGGAGACGCGGGCAGGTGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2994
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TGATATGAGTCTGCGACGGC
Suggested primer 2:CTCGTGTGTGGAGGTCTGAC