Insertion junction: CLIP2.077203_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077203
Chromosome:chromosome 12
Location:3274030
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g499250 PDE10 (1 of 4) K13293 - cAMP-specific phosphodiesterase 4 (PDE4); 3'%252C5'-cyclic-nucleotide phosphodiesterase 5'UTR
Cre12.g499300 PDE31 (1 of 4) K13293 - cAMP-specific phosphodiesterase 4 (PDE4); 3'%252C5'-cyclic-nucleotide phosphodiesterase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGGATTTAATGCTCAACGGCCGCGCAGCGTCAGTTCCGGACACCGAAA
Internal bar code:AAGCACACCTTAGAGTAAATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4592
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAGGTGGCTGCAAAGTC
Suggested primer 2:CAACAACAAGAGGCACTGGC