Insertion junction: CLIP2.077208_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077208
Chromosome:chromosome 12
Location:8948820
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g545500 (1 of 140) IPR002048 - EF-hand domain 3'UTR
Cre12.g545550 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGCTGCGCGTTGCCATGTTTGCAAAGCATCCCGATGACGTTGTTGGG
Internal bar code:GAGTTCGTACTGGCTAGCCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1978
LEAP-Seq percent confirming:24.0741
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGCTAGCGTATGACTGG
Suggested primer 2:TTCACAGAACATGCAAGCGC