Insertion junction: CLIP2.077211_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.077211
Chromosome:chromosome 17
Location:5304713
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g737650 SOM6 (1 of 1) IPR000104//IPR007213//IPR011610//IPR029063 - Antifreeze protein, type I // Leucine carboxyl methyltransferase // S-adenosyl-L-methionine-dependent methyltransferase, putative // S-adenosyl-L-methionine-dependent methyltransferase; S-adenosyl-L-methionine-dependent O-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCTCTGCGCCGCCCGCGAGCCCATCCCCTACCCCATCCATCTGCTGGC
Internal bar code:TTTACCGCAATTATTAAATAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:67
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GACATCTCAGCATGCAAGCG
Suggested primer 2:CACCCATCCCTCTCAAACCC