Insertion junction: CLIP2.077216_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.077216
Chromosome:chromosome 10
Location:2949696
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g440100 (1 of 1) PF10419 - TFIIIC subunit (TFIIIC_sub6) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACGCGCGTGTGCAGCGGCTTTGCATGGCGGTGCACGGCATTGAAACAC
Internal bar code:CAACATTATTTTACGCTTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2210
LEAP-Seq percent confirming:97.6744
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:AACAACGTTTGTGATGCCCG
Suggested primer 2:AGCTTGTCATCGAGGTGAGC