Insertion junction: CLIP2.077225_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.077225
Chromosome:chromosome 1
Location:2413195
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g013801 SXD1,TCY1 (1 of 1) 5.5.1.24 - Tocopherol cyclase; Tocopherol cyclase 1 3'UTR
Cre01.g013850 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGTACGTCCGTCCATACTACGCGTACGTATTGGCGTGTGCGATGGGAC
Internal bar code:CAACGGAGAGGGGTTTACCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1048
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTGGTTAGGCTTGGGAT
Suggested primer 2:AGGATGAGGACGAGGACGAA