Insertion junction: CLIP2.077238_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.077238
Chromosome:chromosome 8
Location:4398750
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre08.g385100 EFH5 EF-hand Calcium binding protein; (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGATACCTACCAATTTACCGAGCGTCGCGTGGTTGCCGTCACCCAGGT
Internal bar code:TCTCCACTCATACCAACTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:485
LEAP-Seq percent confirming:41.6667
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACGTTGTTTAGCGC
Suggested primer 2:CATCCTGCTCAGCGATGACT